Charalampos Kyriakopoulos

Dipl. Ing. Computer Science

Saarland University,

Campus E1 3, Room 326

66123 Saarbrücken


Phone: +49 (0)681 302-5478

Fax:  +49 (0)681 302-5636

E-Mail: charis (-at-)


I am a PhD student at the group of Modelling and Simulation since the beginning of 2014.



  • C. Kyriakopoulos, P. Giehr, G. Fisz, V. Wolf, J. Walter: The Influence of Hydroxylation on Maintaining CpG Methylation Patterns: a HMM approach, PLOS Computational Biology, 2016
  • M. A. Eckersley-Maslin, V. Svensson, C. Krueger, T. Stubbs, P. Giehr, F. Krueger, R. Miragaia, C. Kyriakopoulos, R. Berrens, I. Milagre, J. Walter, S. Teichmann, W. Reik:
    MERVL/Zscan4 Network Activation Results in Transient Genome-wide DNA Demethylation of mESCs
    , Cell Reports, 2016
  • C. Kyriakopoulos, P. Giehr, V. Wolf: H(O)TA: estimation of DNA methylation and hydroxylation levels and efficiencies from time course data, Bioinformatics, 2017
  • C. Kyriakopoulos, G. Grossmann, V. Wolf, L. Bortolussi: Lumping of Degree-Based Mean Field and Pair Approximation Equations for Multistate Contact Processes
    , Physical Review E, 2018
  • P. Giehr, C. Kyriakopoulos, K. Lepikhov, S. Walner, V. Wolf, J. Walter
    Two are better than one: HPoxBS – Hairpin oxidative Bisulfite Sequencing
    , Nucleic Acids Research, 2018
  • G. Grossman, C. Kyriakopoulos, L. Bortolussi, V. Wolf: Lumping the Approximate Master Equation for Multistate Processes in Complex Networks
    , QEST 2018



Teaching Assistance

Other Work

    I have reviewed manuscripts for ASMTA 2016, CAV 2017, CMSB 2014, CMSB 2015, CMSB 2016, CMSB 2018, CONCUR 2018, HSB 2015, HSCC 2016, QEST 2014, QEST 2016, ROCKS 2014 and Bioinformatics Journal.

External Pages